Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 KRT8P47-201ENST00000604727 1398 ntBASIC18.92■□□□□ 0.62
VPS52Q8N1B4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 DNAJB3-201ENST00000446806 729 ntBASIC18.91■□□□□ 0.62
VPS52Q8N1B4 AC112482.1-201ENST00000492080 688 ntBASIC18.91■□□□□ 0.62
VPS52Q8N1B4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 AC006557.2-201ENST00000592985 1240 ntBASIC18.91■□□□□ 0.62
VPS52Q8N1B4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.91■□□□□ 0.62
VPS52Q8N1B4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 PHGDH-209ENST00000641074 1780 ntBASIC18.91■□□□□ 0.62
VPS52Q8N1B4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS52Q8N1B4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 KRT18P27-201ENST00000427733 1299 ntBASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AC103564.2-201ENST00000432853 1299 ntBASIC18.9■□□□□ 0.62
VPS52Q8N1B4 PRYP5-201ENST00000451909 266 ntBASIC18.9■□□□□ 0.62
VPS52Q8N1B4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AC005593.1-201ENST00000624894 515 ntBASIC18.9■□□□□ 0.62
VPS52Q8N1B4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VPS52Q8N1B4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
VPS52Q8N1B4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VPS52Q8N1B4 AC093010.1-201ENST00000473625 1624 ntBASIC18.89■□□□□ 0.62
VPS52Q8N1B4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.89■□□□□ 0.62
VPS52Q8N1B4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AC093677.2-201ENST00000600169 1863 ntBASIC18.89■□□□□ 0.61
VPS52Q8N1B4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 SPDYE21P-201ENST00000413323 827 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms