Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 AC008267.7-201ENST00000624570 1194 ntBASIC23.9■■□□□ 1.42
XRN1Q8IZH2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
XRN1Q8IZH2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.89■■□□□ 1.42
XRN1Q8IZH2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
XRN1Q8IZH2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
XRN1Q8IZH2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC23.89■■□□□ 1.42
XRN1Q8IZH2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
XRN1Q8IZH2 FLJ13224-201ENST00000313737 1514 ntBASIC23.88■■□□□ 1.41
XRN1Q8IZH2 LINC00304-203ENST00000565008 1864 ntBASIC23.88■■□□□ 1.41
XRN1Q8IZH2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 SLC22A20-204ENST00000530038 1673 ntBASIC23.88■■□□□ 1.41
XRN1Q8IZH2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
XRN1Q8IZH2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 HLA-V-201ENST00000429037 534 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AL596325.1-201ENST00000563991 1082 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC073592.8-201ENST00000624126 511 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC142381.1-201ENST00000426099 345 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 AC009118.2-201ENST00000613275 655 ntBASIC23.87■■□□□ 1.41
XRN1Q8IZH2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
XRN1Q8IZH2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 IGHV3-62-201ENST00000520057 340 ntBASIC23.86■■□□□ 1.41
XRN1Q8IZH2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 CR383656.12-201ENST00000549567 513 ntBASIC23.86■■□□□ 1.41
XRN1Q8IZH2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRN1Q8IZH2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 AC012569.1-201ENST00000591191 1524 ntBASIC23.85■■□□□ 1.41
XRN1Q8IZH2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 AC022144.1-201ENST00000602255 1580 ntBASIC23.85■■□□□ 1.41
XRN1Q8IZH2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
XRN1Q8IZH2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms