Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AC109322.1-201ENST00000524499 1264 ntBASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AC093512.1-201ENST00000617969 520 ntBASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 LINC01451-201ENST00000623792 534 ntBASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AL645728.2-201ENST00000641974 660 ntBASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 AL355306.1-201ENST00000415580 579 ntBASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 FAM86C2P-203ENST00000528684 1004 ntBASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 AC026120.1-201ENST00000611536 926 ntBASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 LINC00628-201ENST00000628516 1289 ntBASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPAS4Q8IUM7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 AC140658.5-201ENST00000438532 169 ntBASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS4Q8IUM7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AL627223.1-201ENST00000416693 442 ntBASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 BCRP1-201ENST00000444246 691 ntBASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AL096865.1-201ENST00000606796 927 ntBASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AC099522.2-201ENST00000607001 744 ntBASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms