Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP4Q86YS3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 AL138688.1-201ENST00000624851 1594 ntBASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP4Q86YS3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 AC103564.2-201ENST00000432853 1299 ntBASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 ABCD1P5-201ENST00000445663 754 ntBASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 STK25P1-201ENST00000585406 838 ntBASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 PMPCAP1-201ENST00000508114 1576 ntBASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP4Q86YS3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 EMBP1-201ENST00000458200 901 ntBASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 BX005266.1-201ENST00000473402 457 ntBASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 AC111152.3-201ENST00000569699 673 ntBASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 AP000867.4-201ENST00000641616 219 ntBASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB11FIP4Q86YS3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms