Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AL121672.3-201ENST00000608644 468 ntBASIC16.14■□□□□ 0.17
VRK2Q86Y07 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.14■□□□□ 0.17
VRK2Q86Y07 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VRK2Q86Y07 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.13■□□□□ 0.17
VRK2Q86Y07 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 MYCLP1-201ENST00000372451 1075 ntBASIC16.13■□□□□ 0.17
VRK2Q86Y07 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 CHCHD2P8-201ENST00000429873 447 ntBASIC16.13■□□□□ 0.17
VRK2Q86Y07 AC122714.2-201ENST00000502787 707 ntBASIC16.13■□□□□ 0.17
VRK2Q86Y07 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VRK2Q86Y07 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VRK2Q86Y07 AL049757.1-201ENST00000616842 1596 ntBASIC16.13■□□□□ 0.17
VRK2Q86Y07 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 AC084018.2-201ENST00000613093 2607 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms