Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 SPDYE14P-201ENST00000442619 822 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 AC004890.2-204ENST00000481968 304 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 CR383656.12-201ENST00000549567 513 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 AC107890.1-201ENST00000422478 521 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 MIR6799-201ENST00000620297 69 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 AC084121.4-201ENST00000641598 221 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 AF228730.8-201ENST00000642140 221 ntBASIC14.39□□□□□ -0.11
VPS13CQ709C8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13CQ709C8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13CQ709C8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 SPCS2P4-201ENST00000436160 681 ntBASIC14.38□□□□□ -0.11
VPS13CQ709C8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 SLC25A39P2-201ENST00000537614 270 ntBASIC14.38□□□□□ -0.11
VPS13CQ709C8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 SPDYE7P-202ENST00000420373 878 ntBASIC14.38□□□□□ -0.11
VPS13CQ709C8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.38□□□□□ -0.11
VPS13CQ709C8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13CQ709C8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13CQ709C8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 AC010336.2-201ENST00000564226 506 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 U91328.1-201ENST00000437528 223 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 SLC25A6P2-201ENST00000497974 877 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 STK19B-204ENST00000512515 211 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms