Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 MRPL20P1-201ENST00000400819 433 ntBASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 YBX1P5-201ENST00000509441 847 ntBASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC62Q6P9F0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 AL590787.1-201ENST00000568856 1315 ntBASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 RPS8P6-201ENST00000426177 609 ntBASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 AC005829.1-201ENST00000570002 483 ntBASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 GGTLC5P-201ENST00000617623 998 ntBASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC62Q6P9F0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC62Q6P9F0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC62Q6P9F0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC62Q6P9F0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC62Q6P9F0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms