Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 AC008667.4-201ENST00000607370 168 ntBASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 AC023511.2-201ENST00000618803 211 ntBASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 AL591424.1-201ENST00000442569 1213 ntBASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 KRT18P3-201ENST00000451602 1288 ntBASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 IGHV3-65-201ENST00000523210 341 ntBASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SWSAP1Q6NVH7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 AL590787.1-201ENST00000568856 1315 ntBASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 AC108073.2-201ENST00000464002 357 ntBASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PGAM5P1-201ENST00000518923 814 ntBASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 AC004790.2-201ENST00000623588 572 ntBASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms