Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AC012317.2-201ENST00000623305 2251 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AC020763.4-201ENST00000623414 4170 ntBASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AL354751.1-201ENST00000412768 1863 ntBASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 GGTLC5P-201ENST00000617623 998 ntBASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 AC004877.2-201ENST00000623941 599 ntBASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RNFT1Q5M7Z0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.64■□□□□ 0.1
RNFT1Q5M7Z0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 YBX1P5-201ENST00000509441 847 ntBASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AC096734.2-201ENST00000562054 433 ntBASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 MIR4469-201ENST00000583919 79 ntBASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AL078644.1-201ENST00000609881 752 ntBASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AL139327.4-201ENST00000612362 153 ntBASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms