Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 AC004870.1-201ENST00000315132 882 ntBASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP221Q4G0U5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AC011676.5-201ENST00000624864 2660 ntBASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AL138831.2-201ENST00000606564 490 ntBASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AL121761.2-201ENST00000598007 1648 ntBASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP221Q4G0U5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.02■□□□□ 0.63
CFAP221Q4G0U5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CFAP221Q4G0U5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CFAP221Q4G0U5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AC133963.1-201ENST00000504166 1679 ntBASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AC112698.1-201ENST00000510299 916 ntBASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 AC114341.1-201ENST00000618070 349 ntBASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.01■□□□□ 0.63
CFAP221Q4G0U5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms