Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PGM5P2-202ENST00000637225 1043 ntBASIC20■□□□□ 0.79
USH1GQ495M9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20■□□□□ 0.79
USH1GQ495M9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USH1GQ495M9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
USH1GQ495M9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USH1GQ495M9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USH1GQ495M9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USH1GQ495M9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20■□□□□ 0.79
USH1GQ495M9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
USH1GQ495M9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USH1GQ495M9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
USH1GQ495M9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.99■□□□□ 0.79
USH1GQ495M9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.99■□□□□ 0.79
USH1GQ495M9 RPS15P9-201ENST00000494093 319 ntBASIC19.99■□□□□ 0.79
USH1GQ495M9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.99■□□□□ 0.79
USH1GQ495M9 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.99■□□□□ 0.79
USH1GQ495M9 AL135999.2-201ENST00000622438 1686 ntBASIC19.99■□□□□ 0.79
USH1GQ495M9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USH1GQ495M9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.99■□□□□ 0.79
USH1GQ495M9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
USH1GQ495M9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
USH1GQ495M9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USH1GQ495M9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.98■□□□□ 0.79
USH1GQ495M9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.98■□□□□ 0.79
USH1GQ495M9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USH1GQ495M9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.98■□□□□ 0.79
USH1GQ495M9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
USH1GQ495M9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.98■□□□□ 0.79
USH1GQ495M9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.98■□□□□ 0.79
USH1GQ495M9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USH1GQ495M9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.98■□□□□ 0.79
USH1GQ495M9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.98■□□□□ 0.79
USH1GQ495M9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USH1GQ495M9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USH1GQ495M9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.97■□□□□ 0.79
USH1GQ495M9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
USH1GQ495M9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USH1GQ495M9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.97■□□□□ 0.79
USH1GQ495M9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USH1GQ495M9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.97■□□□□ 0.79
USH1GQ495M9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.97■□□□□ 0.79
USH1GQ495M9 SLC25A6P5-201ENST00000435663 894 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 KRT18P3-201ENST00000451602 1288 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 AL353135.1-201ENST00000606729 504 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 FAM197Y3-203ENST00000618346 717 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 AC090340.1-201ENST00000620778 4980 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 LYSMD4-203ENST00000378904 2122 ntBASIC19.97■□□□□ 0.79
USH1GQ495M9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.97■□□□□ 0.79
USH1GQ495M9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.97■□□□□ 0.79
USH1GQ495M9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USH1GQ495M9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.96■□□□□ 0.79
USH1GQ495M9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.96■□□□□ 0.79
USH1GQ495M9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
USH1GQ495M9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms