Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 AL590787.1-201ENST00000568856 1315 ntBASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 PTCHD3P3-201ENST00000403073 906 ntBASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DCAF4L1Q3SXM0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 PMS2P7-201ENST00000506558 1336 ntBASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 MIR940-201ENST00000401276 94 ntBASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 GGTLC5P-201ENST00000617623 998 ntBASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.81■□□□□ 0.6
DCAF4L1Q3SXM0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 PRSS29P-201ENST00000440800 595 ntBASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 KRT18P3-201ENST00000451602 1288 ntBASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCAF4L1Q3SXM0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms