Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR1224-201ENST00000408193 85 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 AC074051.2-201ENST00000565115 352 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 AC114341.1-201ENST00000618070 349 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 AL121761.2-201ENST00000598007 1648 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 AC104819.1-201ENST00000504587 486 ntBASIC15.24■□□□□ 0.03
HIST1H3AP68431 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 PMPCAP1-201ENST00000508114 1576 ntBASIC15.24■□□□□ 0.03
HIST1H3AP68431 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H3AP68431 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H3AP68431 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AC093525.9-201ENST00000624961 1746 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AC096582.2-201ENST00000510860 516 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 STK19B-204ENST00000512515 211 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 AP000867.3-201ENST00000524675 377 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AP000867.4-201ENST00000641616 219 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HIST1H3AP68431 AC080080.1-201ENST00000625121 2420 ntBASIC15.23■□□□□ 0.03
HIST1H3AP68431 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms