Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SPCS3P61009 TSPY7P-201ENST00000431358 1114 ntBASIC14.24□□□□□ -0.13
SPCS3P61009 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.24□□□□□ -0.13
SPCS3P61009 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
SPCS3P61009 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SPCS3P61009 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.24□□□□□ -0.13
SPCS3P61009 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.24□□□□□ -0.13
SPCS3P61009 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
SPCS3P61009 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
SPCS3P61009 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SPCS3P61009 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 KRT17P2-201ENST00000300992 1314 ntBASIC14.23□□□□□ -0.13
SPCS3P61009 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.23□□□□□ -0.13
SPCS3P61009 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.23□□□□□ -0.13
SPCS3P61009 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.23□□□□□ -0.13
SPCS3P61009 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 KRT89P-201ENST00000620027 1478 ntBASIC14.23□□□□□ -0.13
SPCS3P61009 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.23□□□□□ -0.13
SPCS3P61009 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.23□□□□□ -0.13
SPCS3P61009 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS3P61009 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SPCS3P61009 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.22□□□□□ -0.13
SPCS3P61009 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.22□□□□□ -0.13
SPCS3P61009 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms