Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 SDHAP2-201ENST00000455183 2001 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AC105917.1-201ENST00000506637 2539 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 KRT8P50-201ENST00000562022 1438 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AL158047.1-201ENST00000445918 881 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AC128676.1-201ENST00000454392 318 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 AC004264.1-201ENST00000608354 794 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 LINC00304-203ENST00000565008 1864 ntBASIC13.59□□□□□ -0.23
ERVFC1-1P60608 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ERVFC1-1P60608 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.58□□□□□ -0.23
ERVFC1-1P60608 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 AC034236.2-201ENST00000606662 1610 ntBASIC13.58□□□□□ -0.24
ERVFC1-1P60608 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 MIR564-202ENST00000385049 94 ntBASIC13.58□□□□□ -0.24
ERVFC1-1P60608 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 PRKY-204ENST00000533551 1019 ntBASIC13.58□□□□□ -0.24
ERVFC1-1P60608 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 AC022188.1-201ENST00000620960 1664 ntBASIC13.58□□□□□ -0.24
ERVFC1-1P60608 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ERVFC1-1P60608 AC060834.1-201ENST00000443027 2032 ntBASIC13.57□□□□□ -0.24
ERVFC1-1P60608 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ERVFC1-1P60608 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms