Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXG1P55316 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXG1P55316 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXG1P55316 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXG1P55316 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXG1P55316 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXG1P55316 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXG1P55316 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.27■□□□□ 0.04
FOXG1P55316 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
FOXG1P55316 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXG1P55316 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FOXG1P55316 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXG1P55316 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXG1P55316 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXG1P55316 AP000347.1-202ENST00000435868 847 ntBASIC15.27■□□□□ 0.04
FOXG1P55316 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FOXG1P55316 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXG1P55316 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXG1P55316 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXG1P55316 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXG1P55316 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXG1P55316 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXG1P55316 AC116407.3-201ENST00000623905 1129 ntBASIC15.27■□□□□ 0.04
FOXG1P55316 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXG1P55316 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXG1P55316 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXG1P55316 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXG1P55316 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
FOXG1P55316 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.27■□□□□ 0.03
FOXG1P55316 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FOXG1P55316 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXG1P55316 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FOXG1P55316 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FOXG1P55316 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 LINC00982-205ENST00000420957 435 ntBASIC15.26■□□□□ 0.03
FOXG1P55316 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXG1P55316 AC092910.1-201ENST00000482027 1129 ntBASIC15.26■□□□□ 0.03
FOXG1P55316 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.26■□□□□ 0.03
FOXG1P55316 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXG1P55316 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.26■□□□□ 0.03
FOXG1P55316 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
FOXG1P55316 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
FOXG1P55316 AC008735.5-201ENST00000623544 497 ntBASIC15.26■□□□□ 0.03
FOXG1P55316 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FOXG1P55316 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
FOXG1P55316 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms