Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.59■□□□□ 0.41
LIMK2P53671 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.59■□□□□ 0.41
LIMK2P53671 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LIMK2P53671 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.59■□□□□ 0.41
LIMK2P53671 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LIMK2P53671 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.59■□□□□ 0.41
LIMK2P53671 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 IGHV3-47-201ENST00000425060 335 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.59■□□□□ 0.41
LIMK2P53671 AC068472.1-201ENST00000474589 881 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 VENTXP7-201ENST00000475503 772 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.59■□□□□ 0.41
LIMK2P53671 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 AC099336.1-202ENST00000602961 463 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 AC138894.3-201ENST00000603787 634 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
LIMK2P53671 AC084018.2-201ENST00000613093 2607 ntBASIC17.59■□□□□ 0.41
LIMK2P53671 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LIMK2P53671 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIMK2P53671 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.58■□□□□ 0.41
LIMK2P53671 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
LIMK2P53671 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.58■□□□□ 0.41
LIMK2P53671 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIMK2P53671 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.58■□□□□ 0.4
LIMK2P53671 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 AC096633.1-201ENST00000422446 749 ntBASIC17.58■□□□□ 0.4
LIMK2P53671 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.58■□□□□ 0.4
LIMK2P53671 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.58■□□□□ 0.4
LIMK2P53671 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LIMK2P53671 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.58■□□□□ 0.4
LIMK2P53671 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.58■□□□□ 0.4
LIMK2P53671 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LIMK2P53671 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.58■□□□□ 0.4
LIMK2P53671 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LIMK2P53671 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK2P53671 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK2P53671 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK2P53671 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK2P53671 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LIMK2P53671 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.57■□□□□ 0.4
LIMK2P53671 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 AL139327.4-201ENST00000612362 153 ntBASIC17.57■□□□□ 0.4
LIMK2P53671 AL031008.1-201ENST00000619963 541 ntBASIC17.57■□□□□ 0.4
LIMK2P53671 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms