Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HCFC1P51610 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 IGHV3-52-201ENST00000519770 353 ntBASIC15.14■□□□□ 0.01
HCFC1P51610 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 AC093677.2-201ENST00000600169 1863 ntBASIC15.14■□□□□ 0.01
HCFC1P51610 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.13■□□□□ 0.01
HCFC1P51610 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.13■□□□□ 0.01
HCFC1P51610 SPDYE11-202ENST00000450699 704 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.13■□□□□ 0.01
HCFC1P51610 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.13■□□□□ 0.01
HCFC1P51610 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.13■□□□□ 0.01
HCFC1P51610 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.13■□□□□ 0.01
HCFC1P51610 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.13■□□□□ 0.01
HCFC1P51610 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.13■□□□□ 0.01
HCFC1P51610 SPDYE9P-201ENST00000570642 692 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 SPDYE10P-202ENST00000612005 668 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 SPDYE8P-202ENST00000612377 668 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 AC009093.7-201ENST00000623853 1223 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 AL513210.1-201ENST00000629608 234 ntBASIC15.13■□□□□ 0.01
HCFC1P51610 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.13■□□□□ 0.01
HCFC1P51610 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.13■□□□□ 0.01
HCFC1P51610 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HCFC1P51610 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCFC1P51610 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HCFC1P51610 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.12■□□□□ 0.01
HCFC1P51610 STK25P1-201ENST00000585406 838 ntBASIC15.12■□□□□ 0.01
HCFC1P51610 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 AC006116.8-202ENST00000587620 1550 ntBASIC15.12■□□□□ 0.01
HCFC1P51610 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HCFC1P51610 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.12■□□□□ 0.01
HCFC1P51610 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC1P51610 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.12■□□□□ 0.01
HCFC1P51610 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HCFC1P51610 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 ABALON-201ENST00000629058 1903 ntBASIC15.12■□□□□ 0.01
HCFC1P51610 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HCFC1P51610 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 NOC2LP1-202ENST00000452600 2235 ntBASIC15.11■□□□□ 0.01
HCFC1P51610 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 AC099522.2-201ENST00000607001 744 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms