Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.39■□□□□ 0.53
TUBP50607 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TUBP50607 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TUBP50607 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TUBP50607 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 AC141586.5-201ENST00000624546 2050 ntBASIC18.38■□□□□ 0.53
TUBP50607 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBP50607 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBP50607 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBP50607 AL022342.1-201ENST00000400363 863 ntBASIC18.38■□□□□ 0.53
TUBP50607 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.38■□□□□ 0.53
TUBP50607 PRYP5-201ENST00000451909 266 ntBASIC18.38■□□□□ 0.53
TUBP50607 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.38■□□□□ 0.53
TUBP50607 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.38■□□□□ 0.53
TUBP50607 AC019129.2-201ENST00000609837 1235 ntBASIC18.38■□□□□ 0.53
TUBP50607 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 MIR7706-201ENST00000613747 67 ntBASIC18.38■□□□□ 0.53
TUBP50607 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.38■□□□□ 0.53
TUBP50607 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBP50607 AC073592.5-201ENST00000624854 528 ntBASIC18.38■□□□□ 0.53
TUBP50607 AL022326.1-202ENST00000641533 845 ntBASIC18.38■□□□□ 0.53
TUBP50607 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBP50607 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBP50607 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBP50607 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 AC008764.6-201ENST00000595909 2069 ntBASIC18.37■□□□□ 0.53
TUBP50607 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.37■□□□□ 0.53
TUBP50607 AL590627.1-203ENST00000421194 1026 ntBASIC18.37■□□□□ 0.53
TUBP50607 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.37■□□□□ 0.53
TUBP50607 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
TUBP50607 MTDHP4-201ENST00000600287 670 ntBASIC18.37■□□□□ 0.53
TUBP50607 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.37■□□□□ 0.53
TUBP50607 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TUBP50607 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBP50607 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBP50607 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBP50607 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBP50607 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms