Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 RCN1P2-201ENST00000398357 915 ntBASIC15.54■□□□□ 0.08
CSNK1A1P48729 NUS1P2-201ENST00000417358 873 ntBASIC15.54■□□□□ 0.08
CSNK1A1P48729 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 AC141586.5-201ENST00000624546 2050 ntBASIC15.54■□□□□ 0.08
CSNK1A1P48729 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 INTS4P1-201ENST00000438455 1935 ntBASIC15.54■□□□□ 0.08
CSNK1A1P48729 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1A1P48729 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1A1P48729 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AL049757.1-201ENST00000616842 1596 ntBASIC15.53■□□□□ 0.08
CSNK1A1P48729 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 KRT8P10-201ENST00000450021 1447 ntBASIC15.53■□□□□ 0.08
CSNK1A1P48729 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC138894.3-201ENST00000603787 634 ntBASIC15.53■□□□□ 0.08
CSNK1A1P48729 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 CROCCP2-202ENST00000412962 2773 ntBASIC15.53■□□□□ 0.08
CSNK1A1P48729 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC139713.2-201ENST00000641328 2723 ntBASIC15.53■□□□□ 0.08
CSNK1A1P48729 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1A1P48729 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1A1P48729 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.52■□□□□ 0.08
CSNK1A1P48729 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 MIR3652-201ENST00000579335 131 ntBASIC15.52■□□□□ 0.08
CSNK1A1P48729 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1A1P48729 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1A1P48729 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSNK1A1P48729 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSNK1A1P48729 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CSNK1A1P48729 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSNK1A1P48729 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.52■□□□□ 0.07
CSNK1A1P48729 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSNK1A1P48729 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.52■□□□□ 0.07
CSNK1A1P48729 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.52■□□□□ 0.07
CSNK1A1P48729 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CSNK1A1P48729 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms