Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.67■□□□□ 0.74
TM4SF4P48230 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF4P48230 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
TM4SF4P48230 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TM4SF4P48230 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF4P48230 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 AC009477.1-201ENST00000452936 217 ntBASIC19.66■□□□□ 0.74
TM4SF4P48230 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 AC018529.1-201ENST00000613063 361 ntBASIC19.66■□□□□ 0.74
TM4SF4P48230 SPDYE12P-201ENST00000618416 771 ntBASIC19.66■□□□□ 0.74
TM4SF4P48230 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF4P48230 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TM4SF4P48230 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF4P48230 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.65■□□□□ 0.74
TM4SF4P48230 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 AL162274.1-201ENST00000617191 1098 ntBASIC19.65■□□□□ 0.74
TM4SF4P48230 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF4P48230 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF4P48230 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TM4SF4P48230 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM4SF4P48230 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM4SF4P48230 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM4SF4P48230 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.64■□□□□ 0.74
TM4SF4P48230 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM4SF4P48230 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM4SF4P48230 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.64■□□□□ 0.73
TM4SF4P48230 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF4P48230 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.64■□□□□ 0.73
TM4SF4P48230 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TM4SF4P48230 HLA-V-204ENST00000476601 1289 ntBASIC19.64■□□□□ 0.73
TM4SF4P48230 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.64■□□□□ 0.73
TM4SF4P48230 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.64■□□□□ 0.73
TM4SF4P48230 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TM4SF4P48230 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.64■□□□□ 0.73
TM4SF4P48230 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.64■□□□□ 0.73
TM4SF4P48230 AC007541.1-201ENST00000570282 1469 ntBASIC19.64■□□□□ 0.73
TM4SF4P48230 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TM4SF4P48230 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF4P48230 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF4P48230 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TM4SF4P48230 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF4P48230 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.63■□□□□ 0.73
TM4SF4P48230 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF4P48230 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms