Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 FLJ38576-201ENST00000623820 2459 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 AC009949.1-201ENST00000623048 1830 ntBASIC16.15■□□□□ 0.18
HTR3AP46098 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3AP46098 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HTR3AP46098 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HTR3AP46098 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3AP46098 AC096633.1-201ENST00000422446 749 ntBASIC16.15■□□□□ 0.18
HTR3AP46098 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.15■□□□□ 0.18
HTR3AP46098 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HTR3AP46098 AC103702.1-201ENST00000548801 2630 ntBASIC16.15■□□□□ 0.18
HTR3AP46098 LINC01451-201ENST00000623792 534 ntBASIC16.15■□□□□ 0.18
HTR3AP46098 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
HTR3AP46098 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HTR3AP46098 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
HTR3AP46098 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.15■□□□□ 0.18
HTR3AP46098 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HTR3AP46098 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HTR3AP46098 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HTR3AP46098 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.14■□□□□ 0.17
HTR3AP46098 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HTR3AP46098 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.14■□□□□ 0.17
HTR3AP46098 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3AP46098 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 AC246785.2-201ENST00000432512 513 ntBASIC16.14■□□□□ 0.17
HTR3AP46098 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.14■□□□□ 0.17
HTR3AP46098 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 AL353801.3-201ENST00000609898 542 ntBASIC16.14■□□□□ 0.17
HTR3AP46098 AP000550.4-202ENST00000639755 178 ntBASIC16.14■□□□□ 0.17
HTR3AP46098 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HTR3AP46098 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HTR3AP46098 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.14■□□□□ 0.17
HTR3AP46098 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.14■□□□□ 0.17
HTR3AP46098 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.14■□□□□ 0.17
HTR3AP46098 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HTR3AP46098 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HTR3AP46098 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HTR3AP46098 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms