Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
KDM5CP41229 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 IGHV3-42-201ENST00000520410 361 ntBASIC25.82■■□□□ 1.72
KDM5CP41229 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC25.82■■□□□ 1.72
KDM5CP41229 MIR4515-201ENST00000584082 81 ntBASIC25.82■■□□□ 1.72
KDM5CP41229 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 TSSK5P-201ENST00000423978 907 ntBASIC25.82■■□□□ 1.72
KDM5CP41229 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.82■■□□□ 1.72
KDM5CP41229 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.82■■□□□ 1.72
KDM5CP41229 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM5CP41229 SSH2-211ENST00000590153 570 ntTSL 4 BASIC25.82■■□□□ 1.72
KDM5CP41229 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.82■■□□□ 1.72
KDM5CP41229 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM5CP41229 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
KDM5CP41229 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC25.81■■□□□ 1.72
KDM5CP41229 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.81■■□□□ 1.72
KDM5CP41229 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
KDM5CP41229 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 HLA-V-201ENST00000429037 534 ntBASIC25.81■■□□□ 1.72
KDM5CP41229 AC097493.3-201ENST00000509725 367 ntBASIC25.81■■□□□ 1.72
KDM5CP41229 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC25.81■■□□□ 1.72
KDM5CP41229 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM5CP41229 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM5CP41229 AL020996.1-203ENST00000536896 2307 ntBASIC25.81■■□□□ 1.72
KDM5CP41229 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.81■■□□□ 1.72
KDM5CP41229 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
KDM5CP41229 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM5CP41229 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM5CP41229 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
KDM5CP41229 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC25.8■■□□□ 1.72
KDM5CP41229 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
KDM5CP41229 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 HMGA1P7-201ENST00000406908 502 ntBASIC25.8■■□□□ 1.72
KDM5CP41229 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.8■■□□□ 1.72
KDM5CP41229 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM5CP41229 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
KDM5CP41229 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM5CP41229 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM5CP41229 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KDM5CP41229 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC25.79■■□□□ 1.72
KDM5CP41229 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 HNRNPRP1-201ENST00000453465 1695 ntBASIC25.79■■□□□ 1.72
KDM5CP41229 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
KDM5CP41229 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC25.79■■□□□ 1.72
KDM5CP41229 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC25.79■■□□□ 1.72
KDM5CP41229 RN7SL692P-201ENST00000464677 288 ntBASIC25.79■■□□□ 1.72
KDM5CP41229 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC25.79■■□□□ 1.72
KDM5CP41229 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC25.79■■□□□ 1.72
KDM5CP41229 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC25.79■■□□□ 1.72
KDM5CP41229 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.79■■□□□ 1.72
KDM5CP41229 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM5CP41229 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.78■■□□□ 1.72
KDM5CP41229 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.78■■□□□ 1.72
KDM5CP41229 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM5CP41229 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms