Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC6A4P31645 ACTG1P4-201ENST00000425123 1122 ntBASIC17.87■□□□□ 0.45
SLC6A4P31645 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A4P31645 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A4P31645 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A4P31645 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC6A4P31645 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 HCG11-201ENST00000411553 5696 ntBASIC17.87■□□□□ 0.45
SLC6A4P31645 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC6A4P31645 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC6A4P31645 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.86■□□□□ 0.45
SLC6A4P31645 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC6A4P31645 AC009947.1-201ENST00000444350 727 ntBASIC17.86■□□□□ 0.45
SLC6A4P31645 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC6A4P31645 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC6A4P31645 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 Z83851.2-201ENST00000609564 659 ntBASIC17.86■□□□□ 0.45
SLC6A4P31645 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A4P31645 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SLC6A4P31645 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC6A4P31645 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A4P31645 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A4P31645 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A4P31645 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A4P31645 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC6A4P31645 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC6A4P31645 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC6A4P31645 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC6A4P31645 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 AC005593.1-201ENST00000624894 515 ntBASIC17.85■□□□□ 0.45
SLC6A4P31645 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC6A4P31645 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SLC6A4P31645 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SLC6A4P31645 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 GPR89P-201ENST00000407924 1495 ntBASIC17.84■□□□□ 0.45
SLC6A4P31645 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC6A4P31645 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC6A4P31645 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 AL590787.1-201ENST00000568856 1315 ntBASIC17.84■□□□□ 0.45
SLC6A4P31645 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC6A4P31645 PTCHD3P3-201ENST00000403073 906 ntBASIC17.84■□□□□ 0.45
SLC6A4P31645 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 RPS15P9-201ENST00000494093 319 ntBASIC17.84■□□□□ 0.45
SLC6A4P31645 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.84■□□□□ 0.45
SLC6A4P31645 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC6A4P31645 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC6A4P31645 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC6A4P31645 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SLC6A4P31645 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A4P31645 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC6A4P31645 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms