Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 KLF4P1-201ENST00000412782 1185 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 KRT18P56-201ENST00000507275 550 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 STK19B-204ENST00000512515 211 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AL591684.3-201ENST00000605187 298 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AC073592.5-201ENST00000624854 528 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 PMPCAP1-201ENST00000508114 1576 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPA1P20036 AC132938.5-201ENST00000624980 1813 ntBASIC17.61■□□□□ 0.41
HLA-DPA1P20036 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 FOSL1P1-201ENST00000511041 816 ntBASIC17.6■□□□□ 0.41
HLA-DPA1P20036 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 AP000867.4-201ENST00000641616 219 ntBASIC17.6■□□□□ 0.41
HLA-DPA1P20036 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 AC009336.1-201ENST00000608941 1553 ntBASIC17.6■□□□□ 0.41
HLA-DPA1P20036 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPA1P20036 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms