Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
NFKB1P19838 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFKB1P19838 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
NFKB1P19838 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.74■□□□□ 0.43
NFKB1P19838 POM121L3P-201ENST00000419331 1163 ntBASIC17.74■□□□□ 0.43
NFKB1P19838 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.74■□□□□ 0.43
NFKB1P19838 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.74■□□□□ 0.43
NFKB1P19838 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 STK19B-204ENST00000512515 211 ntBASIC17.74■□□□□ 0.43
NFKB1P19838 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.74■□□□□ 0.43
NFKB1P19838 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.74■□□□□ 0.43
NFKB1P19838 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.74■□□□□ 0.43
NFKB1P19838 AC073592.5-201ENST00000624854 528 ntBASIC17.74■□□□□ 0.43
NFKB1P19838 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.74■□□□□ 0.43
NFKB1P19838 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFKB1P19838 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NFKB1P19838 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 PKD1P1-201ENST00000458669 6805 ntBASIC17.73■□□□□ 0.43
NFKB1P19838 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.73■□□□□ 0.43
NFKB1P19838 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 SLC25A1P3-201ENST00000395415 828 ntBASIC17.73■□□□□ 0.43
NFKB1P19838 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.73■□□□□ 0.43
NFKB1P19838 KLF4P1-201ENST00000412782 1185 ntBASIC17.73■□□□□ 0.43
NFKB1P19838 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.73■□□□□ 0.43
NFKB1P19838 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NFKB1P19838 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 AC009336.1-201ENST00000608941 1553 ntBASIC17.73■□□□□ 0.43
NFKB1P19838 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NFKB1P19838 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFKB1P19838 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.72■□□□□ 0.43
NFKB1P19838 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
NFKB1P19838 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NFKB1P19838 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms