Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.28■□□□□ 0.36
NELFEP18615 KRT18P65-201ENST00000439811 1286 ntBASIC17.28■□□□□ 0.36
NELFEP18615 MTCL1P1-201ENST00000446207 792 ntBASIC17.28■□□□□ 0.36
NELFEP18615 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.28■□□□□ 0.36
NELFEP18615 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.28■□□□□ 0.36
NELFEP18615 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.28■□□□□ 0.36
NELFEP18615 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
NELFEP18615 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 AC104692.2-201ENST00000603054 253 ntBASIC17.28■□□□□ 0.36
NELFEP18615 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NELFEP18615 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 AC093677.2-201ENST00000600169 1863 ntBASIC17.28■□□□□ 0.36
NELFEP18615 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.28■□□□□ 0.36
NELFEP18615 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
NELFEP18615 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
NELFEP18615 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 AC079781.3-201ENST00000449110 356 ntBASIC17.27■□□□□ 0.36
NELFEP18615 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.27■□□□□ 0.36
NELFEP18615 AL160237.2-201ENST00000556165 472 ntBASIC17.27■□□□□ 0.36
NELFEP18615 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.27■□□□□ 0.36
NELFEP18615 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.27■□□□□ 0.36
NELFEP18615 AC005336.2-201ENST00000593183 939 ntBASIC17.27■□□□□ 0.36
NELFEP18615 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NELFEP18615 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.27■□□□□ 0.35
NELFEP18615 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.27■□□□□ 0.35
NELFEP18615 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
NELFEP18615 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.35
NELFEP18615 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.27■□□□□ 0.35
NELFEP18615 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NELFEP18615 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NELFEP18615 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 AC011270.2-201ENST00000624293 2550 ntBASIC17.26■□□□□ 0.35
NELFEP18615 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.26■□□□□ 0.35
NELFEP18615 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 AC096582.2-201ENST00000510860 516 ntBASIC17.26■□□□□ 0.35
NELFEP18615 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.26■□□□□ 0.35
NELFEP18615 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 MIR5100-201ENST00000579544 119 ntBASIC17.26■□□□□ 0.35
NELFEP18615 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms