Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC009336.1-201ENST00000608941 1553 ntBASIC17.54■□□□□ 0.4
CTPS1P17812 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 AL020989.1-201ENST00000422979 469 ntBASIC17.54■□□□□ 0.4
CTPS1P17812 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
CTPS1P17812 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.54■□□□□ 0.4
CTPS1P17812 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.54■□□□□ 0.4
CTPS1P17812 AC104692.2-201ENST00000603054 253 ntBASIC17.54■□□□□ 0.4
CTPS1P17812 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 AC106820.2-201ENST00000563775 3264 ntBASIC17.53■□□□□ 0.4
CTPS1P17812 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.53■□□□□ 0.4
CTPS1P17812 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTPS1P17812 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.53■□□□□ 0.4
CTPS1P17812 FAM197Y8-203ENST00000450145 560 ntBASIC17.53■□□□□ 0.4
CTPS1P17812 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CTPS1P17812 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.53■□□□□ 0.4
CTPS1P17812 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.53■□□□□ 0.4
CTPS1P17812 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.53■□□□□ 0.4
CTPS1P17812 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 PP12613-201ENST00000424958 2230 ntBASIC17.53■□□□□ 0.4
CTPS1P17812 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 AC046185.3-201ENST00000623228 1824 ntBASIC17.53■□□□□ 0.4
CTPS1P17812 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS1P17812 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.53■□□□□ 0.4
CTPS1P17812 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTPS1P17812 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS1P17812 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.52■□□□□ 0.4
CTPS1P17812 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
CTPS1P17812 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.52■□□□□ 0.4
CTPS1P17812 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.52■□□□□ 0.4
CTPS1P17812 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.52■□□□□ 0.4
CTPS1P17812 SCARNA2-201ENST00000458748 420 ntBASIC17.52■□□□□ 0.4
CTPS1P17812 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.52■□□□□ 0.4
CTPS1P17812 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 AP002469.2-201ENST00000531724 424 ntBASIC17.52■□□□□ 0.4
CTPS1P17812 AL160237.2-201ENST00000556165 472 ntBASIC17.52■□□□□ 0.4
CTPS1P17812 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS1P17812 AC021087.4-201ENST00000563761 564 ntBASIC17.52■□□□□ 0.4
CTPS1P17812 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.52■□□□□ 0.4
CTPS1P17812 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS1P17812 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms