Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL11A2P13942 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL11A2P13942 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL11A2P13942 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.07■□□□□ 0.96
COL11A2P13942 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.07■□□□□ 0.96
COL11A2P13942 AC109635.5-201ENST00000533593 962 ntBASIC21.07■□□□□ 0.96
COL11A2P13942 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.07■□□□□ 0.96
COL11A2P13942 MIR3909-201ENST00000579518 119 ntBASIC21.07■□□□□ 0.96
COL11A2P13942 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.07■□□□□ 0.96
COL11A2P13942 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL11A2P13942 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.06■□□□□ 0.96
COL11A2P13942 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.06■□□□□ 0.96
COL11A2P13942 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.06■□□□□ 0.96
COL11A2P13942 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.06■□□□□ 0.96
COL11A2P13942 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.06■□□□□ 0.96
COL11A2P13942 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.06■□□□□ 0.96
COL11A2P13942 KRT8P23-201ENST00000560090 1207 ntBASIC21.06■□□□□ 0.96
COL11A2P13942 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
COL11A2P13942 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
COL11A2P13942 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COL11A2P13942 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.06■□□□□ 0.96
COL11A2P13942 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL11A2P13942 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.05■□□□□ 0.96
COL11A2P13942 SLC22A20-204ENST00000530038 1673 ntBASIC21.05■□□□□ 0.96
COL11A2P13942 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.05■□□□□ 0.96
COL11A2P13942 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL11A2P13942 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.05■□□□□ 0.96
COL11A2P13942 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 FLJ13224-201ENST00000313737 1514 ntBASIC21.05■□□□□ 0.96
COL11A2P13942 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL11A2P13942 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.05■□□□□ 0.96
COL11A2P13942 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.04■□□□□ 0.96
COL11A2P13942 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.04■□□□□ 0.96
COL11A2P13942 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A2P13942 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A2P13942 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 AC010336.2-201ENST00000564226 506 ntBASIC21.04■□□□□ 0.96
COL11A2P13942 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.04■□□□□ 0.96
COL11A2P13942 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
COL11A2P13942 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms