Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.23□□□□□ -0.13
DEFA4P12838 RASA4DP-201ENST00000460726 1199 ntBASIC14.23□□□□□ -0.13
DEFA4P12838 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
DEFA4P12838 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.23□□□□□ -0.13
DEFA4P12838 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 KRT18P55-202ENST00000578578 1546 ntBASIC14.23□□□□□ -0.13
DEFA4P12838 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
DEFA4P12838 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.22□□□□□ -0.13
DEFA4P12838 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
DEFA4P12838 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 AC024563.2-201ENST00000603282 481 ntBASIC14.22□□□□□ -0.13
DEFA4P12838 AC116407.2-201ENST00000613639 860 ntBASIC14.22□□□□□ -0.13
DEFA4P12838 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DEFA4P12838 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.22□□□□□ -0.13
DEFA4P12838 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
DEFA4P12838 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
DEFA4P12838 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.22□□□□□ -0.13
DEFA4P12838 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DEFA4P12838 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms