Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.39■□□□□ 0.54
KRT3P12035 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.39■□□□□ 0.54
KRT3P12035 AL353593.2-201ENST00000602529 1483 ntBASIC18.39■□□□□ 0.54
KRT3P12035 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT3P12035 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT3P12035 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT3P12035 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT3P12035 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRT3P12035 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.39■□□□□ 0.53
KRT3P12035 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT3P12035 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT3P12035 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
KRT3P12035 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT3P12035 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
KRT3P12035 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT3P12035 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
KRT3P12035 STK25P1-201ENST00000585406 838 ntBASIC18.38■□□□□ 0.53
KRT3P12035 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT3P12035 AC099336.1-202ENST00000602961 463 ntBASIC18.38■□□□□ 0.53
KRT3P12035 AC114341.1-201ENST00000618070 349 ntBASIC18.38■□□□□ 0.53
KRT3P12035 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT3P12035 AD001527.2-201ENST00000622994 785 ntBASIC18.38■□□□□ 0.53
KRT3P12035 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KRT3P12035 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT3P12035 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRT3P12035 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.38■□□□□ 0.53
KRT3P12035 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT3P12035 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRT3P12035 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT3P12035 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT3P12035 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRT3P12035 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
KRT3P12035 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRT3P12035 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT3P12035 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRT3P12035 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
KRT3P12035 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT3P12035 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT3P12035 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT3P12035 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
KRT3P12035 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms