Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.83■□□□□ 0.13
FREM3P0C091 POLD2P1-201ENST00000511220 997 ntBASIC15.83■□□□□ 0.13
FREM3P0C091 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.13
FREM3P0C091 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.83■□□□□ 0.13
FREM3P0C091 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
FREM3P0C091 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
FREM3P0C091 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.83■□□□□ 0.13
FREM3P0C091 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
FREM3P0C091 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.83■□□□□ 0.13
FREM3P0C091 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.83■□□□□ 0.13
FREM3P0C091 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
FREM3P0C091 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
FREM3P0C091 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
FREM3P0C091 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
FREM3P0C091 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.83■□□□□ 0.12
FREM3P0C091 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 BX005266.1-201ENST00000473402 457 ntBASIC15.83■□□□□ 0.12
FREM3P0C091 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.83■□□□□ 0.12
FREM3P0C091 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.83■□□□□ 0.12
FREM3P0C091 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.83■□□□□ 0.12
FREM3P0C091 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.83■□□□□ 0.12
FREM3P0C091 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
FREM3P0C091 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FREM3P0C091 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.82■□□□□ 0.12
FREM3P0C091 AC098831.1-202ENST00000438821 336 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.82■□□□□ 0.12
FREM3P0C091 AC034105.1-201ENST00000563488 319 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 AL356488.2-201ENST00000602755 427 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 MIR1199-201ENST00000621445 119 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 AC073592.5-201ENST00000624854 528 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FREM3P0C091 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.82■□□□□ 0.12
FREM3P0C091 KRT18P27-201ENST00000427733 1299 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 AC005104.2-201ENST00000427818 678 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.82■□□□□ 0.12
FREM3P0C091 AC007967.2-201ENST00000432613 625 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.82■□□□□ 0.12
FREM3P0C091 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.82■□□□□ 0.12
FREM3P0C091 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FREM3P0C091 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FREM3P0C091 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.82■□□□□ 0.12
FREM3P0C091 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
FREM3P0C091 HTR7P1-202ENST00000624664 4411 ntBASIC15.82■□□□□ 0.12
FREM3P0C091 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.81■□□□□ 0.12
FREM3P0C091 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FREM3P0C091 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
FREM3P0C091 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FREM3P0C091 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.81■□□□□ 0.12
FREM3P0C091 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FREM3P0C091 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.81■□□□□ 0.12
FREM3P0C091 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.81■□□□□ 0.12
FREM3P0C091 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms