Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 AL353692.3-201ENST00000407031 1396 ntBASIC15.5■□□□□ 0.07
ERCC1P07992 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 TNRC18P3-201ENST00000441896 2691 ntBASIC15.5■□□□□ 0.07
ERCC1P07992 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 NUS1P1-201ENST00000446295 882 ntBASIC15.5■□□□□ 0.07
ERCC1P07992 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.5■□□□□ 0.07
ERCC1P07992 AC011840.4-201ENST00000578471 627 ntBASIC15.5■□□□□ 0.07
ERCC1P07992 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
ERCC1P07992 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC1P07992 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ERCC1P07992 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC1P07992 PP12613-201ENST00000424958 2230 ntBASIC15.49■□□□□ 0.07
ERCC1P07992 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC1P07992 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC1P07992 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC1P07992 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC1P07992 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 AC132938.6-201ENST00000623828 1655 ntBASIC15.49■□□□□ 0.07
ERCC1P07992 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ERCC1P07992 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC1P07992 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC1P07992 DUSP5P1-201ENST00000441325 1139 ntBASIC15.49■□□□□ 0.07
ERCC1P07992 TOB2P1-201ENST00000469761 992 ntBASIC15.49■□□□□ 0.07
ERCC1P07992 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC1P07992 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC1P07992 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC1P07992 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ERCC1P07992 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC1P07992 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC1P07992 AD000864.1-201ENST00000624076 2295 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms