Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CSF1RP07333 DNAJB3-202ENST00000449667 1266 ntBASIC21.31■■□□□ 1
CSF1RP07333 AC107918.2-201ENST00000530817 355 ntBASIC21.31■■□□□ 1
CSF1RP07333 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CSF1RP07333 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.31■■□□□ 1
CSF1RP07333 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.31■■□□□ 1
CSF1RP07333 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSF1RP07333 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CSF1RP07333 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSF1RP07333 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CSF1RP07333 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSF1RP07333 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSF1RP07333 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.3■■□□□ 1
CSF1RP07333 RPS8P6-201ENST00000426177 609 ntBASIC21.3■■□□□ 1
CSF1RP07333 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.3■■□□□ 1
CSF1RP07333 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.3■■□□□ 1
CSF1RP07333 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.3■■□□□ 1
CSF1RP07333 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.3■■□□□ 1
CSF1RP07333 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.3■■□□□ 1
CSF1RP07333 REXO1L3P-201ENST00000622202 1288 ntBASIC21.3■■□□□ 1
CSF1RP07333 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.3■■□□□ 1
CSF1RP07333 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSF1RP07333 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSF1RP07333 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSF1RP07333 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CSF1RP07333 ELL2P1-201ENST00000413990 1906 ntBASIC21.29■■□□□ 1
CSF1RP07333 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.29■■□□□ 1
CSF1RP07333 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.29■■□□□ 1
CSF1RP07333 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CSF1RP07333 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.29■■□□□ 1
CSF1RP07333 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSF1RP07333 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.29■■□□□ 1
CSF1RP07333 AL031432.2-201ENST00000566714 459 ntBASIC21.29■■□□□ 1
CSF1RP07333 AL928711.1-201ENST00000570165 459 ntBASIC21.29■■□□□ 1
CSF1RP07333 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.29■■□□□ 1
CSF1RP07333 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.29■■□□□ 1
CSF1RP07333 AL078644.1-201ENST00000609881 752 ntBASIC21.29■■□□□ 1
CSF1RP07333 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSF1RP07333 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.29■■□□□ 1
CSF1RP07333 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSF1RP07333 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 AC134043.2-201ENST00000624206 2238 ntBASIC21.28■■□□□ 1
CSF1RP07333 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.28■■□□□ 1
CSF1RP07333 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
CSF1RP07333 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.28■■□□□ 1
CSF1RP07333 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.28■■□□□ 1
CSF1RP07333 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.28■■□□□ 1
CSF1RP07333 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.28■■□□□ 1
CSF1RP07333 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.28■■□□□ 1
CSF1RP07333 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.28■■□□□ 1
CSF1RP07333 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.28■■□□□ 1
CSF1RP07333 AC079781.4-201ENST00000641908 219 ntBASIC21.28■■□□□ 1
CSF1RP07333 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.28■■□□□ 1
CSF1RP07333 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CSF1RP07333 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.28■■□□□ 1
CSF1RP07333 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSF1RP07333 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.28■■□□□ 1
CSF1RP07333 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.27■■□□□ 1
CSF1RP07333 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CSF1RP07333 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.27■■□□□ 1
CSF1RP07333 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.27■■□□□ 1
CSF1RP07333 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.27■■□□□ 1
CSF1RP07333 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CSF1RP07333 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.27■■□□□ 1
CSF1RP07333 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.27■■□□□ 1
CSF1RP07333 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.27■■□□□ 1
CSF1RP07333 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.27■■□□□ 1
CSF1RP07333 AC016396.2-201ENST00000562575 1417 ntBASIC21.27■■□□□ 1
CSF1RP07333 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.27■■□□□ 1
CSF1RP07333 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSF1RP07333 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms