Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.33■□□□□ 0.52
RB1P06400 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.33■□□□□ 0.52
RB1P06400 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.33■□□□□ 0.52
RB1P06400 AC243562.1-201ENST00000560672 389 ntBASIC18.33■□□□□ 0.52
RB1P06400 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.33■□□□□ 0.52
RB1P06400 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 AL035252.4-201ENST00000624174 288 ntBASIC18.33■□□□□ 0.52
RB1P06400 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 CROCCP3-202ENST00000420820 1947 ntBASIC18.32■□□□□ 0.52
RB1P06400 MIR943-201ENST00000401286 94 ntBASIC18.32■□□□□ 0.52
RB1P06400 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.32■□□□□ 0.52
RB1P06400 KLF2P3-201ENST00000451977 1087 ntBASIC18.32■□□□□ 0.52
RB1P06400 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.32■□□□□ 0.52
RB1P06400 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 RARRES2P8-201ENST00000566335 367 ntBASIC18.32■□□□□ 0.52
RB1P06400 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.32■□□□□ 0.52
RB1P06400 AL161645.1-201ENST00000622716 1255 ntBASIC18.32■□□□□ 0.52
RB1P06400 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 AC046185.3-201ENST00000623228 1824 ntBASIC18.32■□□□□ 0.52
RB1P06400 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.32■□□□□ 0.52
RB1P06400 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RB1P06400 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
RB1P06400 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.32■□□□□ 0.52
RB1P06400 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RB1P06400 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RB1P06400 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
RB1P06400 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.31■□□□□ 0.52
RB1P06400 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.31■□□□□ 0.52
RB1P06400 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RB1P06400 TSPY16P-201ENST00000449843 468 ntBASIC18.31■□□□□ 0.52
RB1P06400 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.31■□□□□ 0.52
RB1P06400 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.31■□□□□ 0.52
RB1P06400 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.31■□□□□ 0.52
RB1P06400 MIR4515-201ENST00000584082 81 ntBASIC18.31■□□□□ 0.52
RB1P06400 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.31■□□□□ 0.52
RB1P06400 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
RB1P06400 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RB1P06400 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RB1P06400 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.3■□□□□ 0.52
RB1P06400 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RB1P06400 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 AC087289.5-201ENST00000586076 3175 ntBASIC18.3■□□□□ 0.52
RB1P06400 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RB1P06400 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 AP000974.1-201ENST00000623909 2387 ntBASIC18.3■□□□□ 0.52
RB1P06400 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.3■□□□□ 0.52
RB1P06400 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RB1P06400 AC107890.1-201ENST00000422478 521 ntBASIC18.3■□□□□ 0.52
RB1P06400 FAM58DP-201ENST00000428076 619 ntBASIC18.3■□□□□ 0.52
RB1P06400 AC002472.2-201ENST00000442739 958 ntBASIC18.3■□□□□ 0.52
RB1P06400 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.3■□□□□ 0.52
RB1P06400 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.3■□□□□ 0.52
RB1P06400 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 TNXA-203ENST00000507684 2038 ntBASIC18.3■□□□□ 0.52
RB1P06400 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.3■□□□□ 0.52
RB1P06400 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RB1P06400 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.3■□□□□ 0.52
RB1P06400 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RB1P06400 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms