Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD4O95243 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MBD4O95243 ACTG1P4-201ENST00000425123 1122 ntBASIC20.78■□□□□ 0.92
MBD4O95243 UNC93B6-202ENST00000528242 690 ntBASIC20.78■□□□□ 0.92
MBD4O95243 AL671883.3-201ENST00000603274 991 ntBASIC20.78■□□□□ 0.92
MBD4O95243 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD4O95243 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
MBD4O95243 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD4O95243 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD4O95243 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MBD4O95243 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD4O95243 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MBD4O95243 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD4O95243 AC106730.1-201ENST00000566722 1090 ntBASIC20.77■□□□□ 0.92
MBD4O95243 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MBD4O95243 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MBD4O95243 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MBD4O95243 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MBD4O95243 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
MBD4O95243 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
MBD4O95243 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.76■□□□□ 0.91
MBD4O95243 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MBD4O95243 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
MBD4O95243 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.76■□□□□ 0.91
MBD4O95243 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.76■□□□□ 0.91
MBD4O95243 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.76■□□□□ 0.91
MBD4O95243 AC145285.3-201ENST00000564603 959 ntBASIC20.76■□□□□ 0.91
MBD4O95243 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.76■□□□□ 0.91
MBD4O95243 AC005593.1-201ENST00000624894 515 ntBASIC20.76■□□□□ 0.91
MBD4O95243 HTR7P1-202ENST00000624664 4411 ntBASIC20.76■□□□□ 0.91
MBD4O95243 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
MBD4O95243 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD4O95243 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
MBD4O95243 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD4O95243 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD4O95243 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD4O95243 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD4O95243 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD4O95243 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD4O95243 AC034105.1-201ENST00000563488 319 ntBASIC20.75■□□□□ 0.91
MBD4O95243 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD4O95243 Z83851.2-201ENST00000609564 659 ntBASIC20.75■□□□□ 0.91
MBD4O95243 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MBD4O95243 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.75■□□□□ 0.91
MBD4O95243 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD4O95243 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MBD4O95243 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.75■□□□□ 0.91
MBD4O95243 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MBD4O95243 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MBD4O95243 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MBD4O95243 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MBD4O95243 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.74■□□□□ 0.91
MBD4O95243 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MBD4O95243 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.74■□□□□ 0.91
MBD4O95243 MIR574-201ENST00000385209 96 ntBASIC20.74■□□□□ 0.91
MBD4O95243 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
MBD4O95243 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MBD4O95243 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 AC009947.1-201ENST00000444350 727 ntBASIC20.74■□□□□ 0.91
MBD4O95243 RPS15P9-201ENST00000494093 319 ntBASIC20.74■□□□□ 0.91
MBD4O95243 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MBD4O95243 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD4O95243 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD4O95243 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD4O95243 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms