Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 PCDHA1-201ENST00000378133 2726 ntBASIC14.35□□□□□ -0.11
SCAF4O95104 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.35□□□□□ -0.11
SCAF4O95104 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 NAPSB-206ENST00000562112 1266 ntBASIC14.35□□□□□ -0.11
SCAF4O95104 C2orf69P3-201ENST00000565542 1120 ntBASIC14.35□□□□□ -0.11
SCAF4O95104 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.35□□□□□ -0.11
SCAF4O95104 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.35□□□□□ -0.11
SCAF4O95104 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SCAF4O95104 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 AGGF1P2-201ENST00000426656 2106 ntBASIC14.35□□□□□ -0.11
SCAF4O95104 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.35□□□□□ -0.11
SCAF4O95104 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCAF4O95104 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.34□□□□□ -0.11
SCAF4O95104 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCAF4O95104 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAF4O95104 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.34□□□□□ -0.11
SCAF4O95104 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 FLJ38576-201ENST00000623820 2459 ntBASIC14.34□□□□□ -0.11
SCAF4O95104 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAF4O95104 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.34□□□□□ -0.11
SCAF4O95104 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SCAF4O95104 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAF4O95104 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.34□□□□□ -0.11
SCAF4O95104 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.34□□□□□ -0.11
SCAF4O95104 AP005242.2-201ENST00000580065 1175 ntBASIC14.34□□□□□ -0.11
SCAF4O95104 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAF4O95104 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAF4O95104 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms