Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM3O75382 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM3O75382 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM3O75382 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM3O75382 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 AC022898.2-201ENST00000616822 1312 ntBASIC16.31■□□□□ 0.2
TRIM3O75382 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM3O75382 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM3O75382 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM3O75382 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 AC009533.2-201ENST00000543664 586 ntBASIC16.31■□□□□ 0.2
TRIM3O75382 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM3O75382 IFNL4P1-201ENST00000607083 540 ntBASIC16.31■□□□□ 0.2
TRIM3O75382 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM3O75382 AC114341.1-201ENST00000618070 349 ntBASIC16.31■□□□□ 0.2
TRIM3O75382 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM3O75382 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM3O75382 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM3O75382 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM3O75382 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM3O75382 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRIM3O75382 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM3O75382 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 NUS1P2-201ENST00000417358 873 ntBASIC16.3■□□□□ 0.2
TRIM3O75382 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM3O75382 TPM4P1-201ENST00000436100 807 ntBASIC16.3■□□□□ 0.2
TRIM3O75382 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM3O75382 AC096582.2-201ENST00000510860 516 ntBASIC16.3■□□□□ 0.2
TRIM3O75382 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM3O75382 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM3O75382 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM3O75382 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM3O75382 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.3■□□□□ 0.2
TRIM3O75382 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM3O75382 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM3O75382 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM3O75382 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM3O75382 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 AL391005.1-201ENST00000623953 2435 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM3O75382 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM3O75382 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRIM3O75382 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms