Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CPNE3O75131 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CPNE3O75131 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE3O75131 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE3O75131 RPL13AP23-201ENST00000480739 586 ntBASIC16.77■□□□□ 0.28
CPNE3O75131 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.77■□□□□ 0.28
CPNE3O75131 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE3O75131 AC116407.2-201ENST00000613639 860 ntBASIC16.77■□□□□ 0.28
CPNE3O75131 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE3O75131 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE3O75131 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CPNE3O75131 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE3O75131 AC079776.2-201ENST00000641154 1609 ntBASIC16.77■□□□□ 0.27
CPNE3O75131 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE3O75131 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CPNE3O75131 PMPCAP1-201ENST00000508114 1576 ntBASIC16.77■□□□□ 0.27
CPNE3O75131 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 COX5BP2-201ENST00000392354 334 ntBASIC16.76■□□□□ 0.27
CPNE3O75131 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.76■□□□□ 0.27
CPNE3O75131 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.76■□□□□ 0.27
CPNE3O75131 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CPNE3O75131 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 AD001527.2-201ENST00000622994 785 ntBASIC16.76■□□□□ 0.27
CPNE3O75131 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE3O75131 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE3O75131 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE3O75131 AC093677.2-201ENST00000600169 1863 ntBASIC16.76■□□□□ 0.27
CPNE3O75131 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE3O75131 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE3O75131 LAGE3P1-201ENST00000425356 484 ntBASIC16.75■□□□□ 0.27
CPNE3O75131 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE3O75131 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 AC008735.5-201ENST00000623544 497 ntBASIC16.75■□□□□ 0.27
CPNE3O75131 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 AL022326.1-202ENST00000641533 845 ntBASIC16.75■□□□□ 0.27
CPNE3O75131 AC107918.4-202ENST00000641623 219 ntBASIC16.75■□□□□ 0.27
CPNE3O75131 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CPNE3O75131 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE3O75131 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms