Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KLHL41O60662 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KLHL41O60662 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KLHL41O60662 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL41O60662 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KLHL41O60662 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL41O60662 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL41O60662 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL41O60662 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.35■□□□□ 0.37
KLHL41O60662 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
KLHL41O60662 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KLHL41O60662 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.35■□□□□ 0.37
KLHL41O60662 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
KLHL41O60662 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL41O60662 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL41O60662 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KLHL41O60662 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL41O60662 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL41O60662 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.35■□□□□ 0.37
KLHL41O60662 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 CLEC4GP1-201ENST00000596555 870 ntBASIC17.34■□□□□ 0.37
KLHL41O60662 AC022898.2-201ENST00000616822 1312 ntBASIC17.34■□□□□ 0.37
KLHL41O60662 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL41O60662 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
KLHL41O60662 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KLHL41O60662 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
KLHL41O60662 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
KLHL41O60662 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHL41O60662 REXO1L11P-201ENST00000620964 1927 ntBASIC17.33■□□□□ 0.37
KLHL41O60662 AC009949.1-201ENST00000623048 1830 ntBASIC17.33■□□□□ 0.37
KLHL41O60662 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHL41O60662 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL41O60662 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHL41O60662 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL41O60662 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL41O60662 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KLHL41O60662 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
KLHL41O60662 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.33■□□□□ 0.36
KLHL41O60662 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL41O60662 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KLHL41O60662 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHL41O60662 DUSP5P1-201ENST00000441325 1139 ntBASIC17.33■□□□□ 0.36
KLHL41O60662 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL41O60662 MIR3652-201ENST00000579335 131 ntBASIC17.33■□□□□ 0.36
KLHL41O60662 MIR3180-4-201ENST00000582223 153 ntBASIC17.33■□□□□ 0.36
KLHL41O60662 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms