Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDH7O60245 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
PCDH7O60245 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH7O60245 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDH7O60245 AC111152.3-201ENST00000569699 673 ntBASIC16.68■□□□□ 0.26
PCDH7O60245 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDH7O60245 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH7O60245 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 AC116353.5-201ENST00000638148 1699 ntBASIC16.67■□□□□ 0.26
PCDH7O60245 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 AC103564.2-201ENST00000432853 1299 ntBASIC16.67■□□□□ 0.26
PCDH7O60245 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 AC009533.2-201ENST00000543664 586 ntBASIC16.67■□□□□ 0.26
PCDH7O60245 AP005901.3-202ENST00000581653 237 ntBASIC16.67■□□□□ 0.26
PCDH7O60245 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH7O60245 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH7O60245 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH7O60245 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDH7O60245 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH7O60245 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH7O60245 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDH7O60245 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDH7O60245 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDH7O60245 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDH7O60245 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDH7O60245 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDH7O60245 AL049757.1-201ENST00000616842 1596 ntBASIC16.66■□□□□ 0.26
PCDH7O60245 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDH7O60245 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH7O60245 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH7O60245 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH7O60245 AC046185.3-201ENST00000623228 1824 ntBASIC16.66■□□□□ 0.26
PCDH7O60245 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms