Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 AL031284.1-201ENST00000419297 478 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 ACTG1P4-201ENST00000425123 1122 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 AP000347.1-202ENST00000435868 847 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 OR7E14P-202ENST00000530490 1290 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 FAM215A-202ENST00000632077 792 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 PP12613-201ENST00000424958 2230 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 AC097637.2-201ENST00000624096 1997 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 SLC25A1P3-201ENST00000395415 828 ntBASIC16.72■□□□□ 0.27
PRICKLE3O43900 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 LAGE3P1-201ENST00000425356 484 ntBASIC16.72■□□□□ 0.27
PRICKLE3O43900 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRICKLE3O43900 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRICKLE3O43900 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 NCF1C-201ENST00000438382 1427 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 PCDHB18P-201ENST00000524813 2368 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 LINC00982-205ENST00000420957 435 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 KRT18P27-201ENST00000427733 1299 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 AC012640.2-201ENST00000561606 901 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 AC139887.3-201ENST00000568585 713 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 AL049840.3-201ENST00000602669 611 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 AL353135.1-201ENST00000606729 504 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
PRICKLE3O43900 AC004706.3-202ENST00000621574 984 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 AC005332.8-201ENST00000622750 2735 ntBASIC16.71■□□□□ 0.27
PRICKLE3O43900 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRICKLE3O43900 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PRICKLE3O43900 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRICKLE3O43900 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRICKLE3O43900 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRICKLE3O43900 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms