Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 LYSMD4-203ENST00000378904 2122 ntBASIC19.62■□□□□ 0.73
CHMP2AO43633 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.62■□□□□ 0.73
CHMP2AO43633 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.62■□□□□ 0.73
CHMP2AO43633 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 AC046185.3-201ENST00000623228 1824 ntBASIC19.62■□□□□ 0.73
CHMP2AO43633 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHMP2AO43633 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP2AO43633 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHMP2AO43633 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 AC243591.1-201ENST00000452967 1364 ntBASIC19.61■□□□□ 0.73
CHMP2AO43633 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.61■□□□□ 0.73
CHMP2AO43633 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 AC012640.2-201ENST00000561606 901 ntBASIC19.61■□□□□ 0.73
CHMP2AO43633 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP2AO43633 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP2AO43633 AL139327.4-201ENST00000612362 153 ntBASIC19.61■□□□□ 0.73
CHMP2AO43633 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2AO43633 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2AO43633 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2AO43633 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CHMP2AO43633 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP2AO43633 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP2AO43633 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP2AO43633 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP2AO43633 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP2AO43633 AC120114.3-201ENST00000611923 658 ntBASIC19.6■□□□□ 0.73
CHMP2AO43633 AC107918.4-202ENST00000641623 219 ntBASIC19.6■□□□□ 0.73
CHMP2AO43633 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CHMP2AO43633 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP2AO43633 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2AO43633 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 AC097637.2-201ENST00000624096 1997 ntBASIC19.59■□□□□ 0.73
CHMP2AO43633 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP2AO43633 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms