Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.06■□□□□ 0.16
TO15178 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 SART3-203ENST00000546611 1184 ntBASIC16.06■□□□□ 0.16
TO15178 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.06■□□□□ 0.16
TO15178 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.06■□□□□ 0.16
TO15178 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TO15178 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TO15178 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
TO15178 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TO15178 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.05■□□□□ 0.16
TO15178 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.05■□□□□ 0.16
TO15178 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.05■□□□□ 0.16
TO15178 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.05■□□□□ 0.16
TO15178 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TO15178 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TO15178 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.05■□□□□ 0.16
TO15178 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.05■□□□□ 0.16
TO15178 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.05■□□□□ 0.16
TO15178 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.05■□□□□ 0.16
TO15178 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.05■□□□□ 0.16
TO15178 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.05■□□□□ 0.16
TO15178 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.05■□□□□ 0.16
TO15178 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TO15178 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
TO15178 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TO15178 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TO15178 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TO15178 AL135999.2-201ENST00000622438 1686 ntBASIC16.05■□□□□ 0.16
TO15178 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
TO15178 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.04■□□□□ 0.16
TO15178 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TO15178 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TO15178 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TO15178 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.04■□□□□ 0.16
TO15178 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.04■□□□□ 0.16
TO15178 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.04■□□□□ 0.16
TO15178 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.04■□□□□ 0.16
TO15178 TPM4P1-201ENST00000436100 807 ntBASIC16.04■□□□□ 0.16
TO15178 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 BX005266.1-201ENST00000473402 457 ntBASIC16.04■□□□□ 0.16
TO15178 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.04■□□□□ 0.16
TO15178 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.04■□□□□ 0.16
TO15178 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.04■□□□□ 0.16
TO15178 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.04■□□□□ 0.16
TO15178 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TO15178 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.04■□□□□ 0.16
TO15178 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TO15178 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.04■□□□□ 0.16
TO15178 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TO15178 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms