Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.28■□□□□ 0.36
TLR4O00206 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.28■□□□□ 0.36
TLR4O00206 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.28■□□□□ 0.36
TLR4O00206 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
TLR4O00206 AC134684.3-201ENST00000641758 218 ntBASIC17.28■□□□□ 0.36
TLR4O00206 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TLR4O00206 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR4O00206 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TLR4O00206 AC100803.2-201ENST00000562459 1963 ntBASIC17.28■□□□□ 0.36
TLR4O00206 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 AC135776.1-201ENST00000319817 2481 ntBASIC17.27■□□□□ 0.36
TLR4O00206 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.27■□□□□ 0.36
TLR4O00206 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TLR4O00206 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.27■□□□□ 0.36
TLR4O00206 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TLR4O00206 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TLR4O00206 DDX43P3-201ENST00000441064 443 ntBASIC17.27■□□□□ 0.36
TLR4O00206 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 RPS15P9-201ENST00000494093 319 ntBASIC17.27■□□□□ 0.36
TLR4O00206 IGHV3-52-201ENST00000519770 353 ntBASIC17.27■□□□□ 0.36
TLR4O00206 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.27■□□□□ 0.36
TLR4O00206 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.27■□□□□ 0.36
TLR4O00206 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TLR4O00206 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.27■□□□□ 0.36
TLR4O00206 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TLR4O00206 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TLR4O00206 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TLR4O00206 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 AC009949.1-201ENST00000623048 1830 ntBASIC17.26■□□□□ 0.35
TLR4O00206 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 AP000997.3-201ENST00000623333 2250 ntBASIC17.26■□□□□ 0.35
TLR4O00206 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TLR4O00206 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR4O00206 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 VN2R19P-201ENST00000442399 1052 ntBASIC17.26■□□□□ 0.35
TLR4O00206 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR4O00206 AC108073.2-201ENST00000464002 357 ntBASIC17.26■□□□□ 0.35
TLR4O00206 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 STK19B-204ENST00000512515 211 ntBASIC17.26■□□□□ 0.35
TLR4O00206 IGHV3-65-201ENST00000523210 341 ntBASIC17.26■□□□□ 0.35
TLR4O00206 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR4O00206 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR4O00206 MIR4751-201ENST00000578027 74 ntBASIC17.26■□□□□ 0.35
TLR4O00206 STK25P1-201ENST00000585406 838 ntBASIC17.26■□□□□ 0.35
TLR4O00206 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 AC008667.4-201ENST00000607370 168 ntBASIC17.26■□□□□ 0.35
TLR4O00206 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR4O00206 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TLR4O00206 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR4O00206 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms