Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 KRT18P11-201ENST00000435214 1283 ntBASIC17.13■□□□□ 0.33
VGLL3A8MV65 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 AC137761.2-201ENST00000561729 223 ntBASIC17.13■□□□□ 0.33
VGLL3A8MV65 AC145350.3-201ENST00000569033 163 ntBASIC17.13■□□□□ 0.33
VGLL3A8MV65 IKBKGP1-201ENST00000612193 1073 ntBASIC17.13■□□□□ 0.33
VGLL3A8MV65 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.13■□□□□ 0.33
VGLL3A8MV65 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.13■□□□□ 0.33
VGLL3A8MV65 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VGLL3A8MV65 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 EEF1DP3-203ENST00000566025 782 ntBASIC17.12■□□□□ 0.33
VGLL3A8MV65 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 AC104187.1-201ENST00000607510 612 ntBASIC17.12■□□□□ 0.33
VGLL3A8MV65 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 CICP17-201ENST00000418553 2377 ntBASIC17.12■□□□□ 0.33
VGLL3A8MV65 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 REXO1L2P-201ENST00000425429 2069 ntBASIC17.12■□□□□ 0.33
VGLL3A8MV65 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VGLL3A8MV65 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
VGLL3A8MV65 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 AC016769.1-201ENST00000409132 1010 ntBASIC17.11■□□□□ 0.33
VGLL3A8MV65 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 AC053503.5-201ENST00000601508 636 ntBASIC17.11■□□□□ 0.33
VGLL3A8MV65 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 MIR2861-201ENST00000636310 90 ntBASIC17.11■□□□□ 0.33
VGLL3A8MV65 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
VGLL3A8MV65 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VGLL3A8MV65 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms