Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 CYP2T1P-202ENST00000641596 2535 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 STARP1-201ENST00000397973 869 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 COX11P1-201ENST00000489116 835 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 AL441883.1-201ENST00000566170 1045 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-7A0A0A0MS04 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 IGHGP-201ENST00000390555 1178 ntBASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SPDYE15P-201ENST00000424157 909 ntBASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-7A0A0A0MS04 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC007950.2-201ENST00000615045 2347 ntBASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRBV6-7A0A0A0MS04 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms