Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AL513480.1-201ENST00000451731 511 ntBASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 HLA-J-203ENST00000494367 1087 ntBASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AC022145.2-201ENST00000598203 171 ntBASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AC093512.1-201ENST00000617969 520 ntBASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC187A0A096LP49 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 AC023141.5-201ENST00000458585 616 ntBASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 AL138781.2-201ENST00000617896 1843 ntBASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC187A0A096LP49 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 AC006116.8-202ENST00000587620 1550 ntBASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 AL096865.1-201ENST00000606796 927 ntBASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 AC020763.4-201ENST00000623414 4170 ntBASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 AC135776.1-201ENST00000319817 2481 ntBASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms