Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3EA0A087X179 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 RPS8P6-201ENST00000426177 609 ntBASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 AL805961.1-202ENST00000641562 540 ntBASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3EA0A087X179 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.33■□□□□ 0.37
TBC1D3EA0A087X179 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 MRPL20P1-201ENST00000400819 433 ntBASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 GGTLC5P-201ENST00000617623 998 ntBASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3EA0A087X179 BICD1-207ENST00000551848 1962 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms