Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 LINC01238-205ENST00000567549 1107 ntBASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4B1Q9Y6B7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 TSPY5P-201ENST00000426936 936 ntBASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC011558.1-201ENST00000623459 338 ntBASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4B1Q9Y6B7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AC034236.2-201ENST00000606662 1610 ntBASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AL023973.1-201ENST00000624619 620 ntBASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AC112497.1-201ENST00000624824 639 ntBASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AL590326.2-201ENST00000625139 305 ntBASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4B1Q9Y6B7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms